AgBioData publications:
- Deng, C.H., Naithani, S., Kumari, S., Cobo-Simon, I., Quezada-Rodriguez, E.H., Skrabisova, M., Gladman, N., Correll, M.J., Sikiru, A.B., Afuwape, O.O., Marrano, A., Rebollo, I., Zhang, W., Jung, S. (2023) Agricultural Sciences in the Big Data Era: Genotype and Phenotype Data Standardization, Utilization and Integration. Preprints
- Saha, S., Cain, S., Cannon, E.K., Dunn, N. Farmer, A., Hu, Z., Maslen, G., Moxon, S., Mungall, C.J., Nelson, R., Poelchau, M.F. (2022). Recommendations for extending the GFF3 specification for improved interoperability of genomic data. arXiv.
- Harper, L., Campbell, J., Cannon, E.K., Jung, S., Poelchau, M., Walls, R., ... & Cannon, S. (2018). AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. Database, 1-32.
- Reiser, L., Harper, L., Freeling, M., Han, B., Luan, S. (2018). FAIR: A Call to Make Published Data More Findable, Accessible, Interoperable, and Reusable. Molecular Plant, 11(9):1105-1108.
AgBioData at conferences:
2022
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Reiser, L., Campbell, D., Campbell, J., Cannon, E., Cooper, L., Harper, L., Huala, E., Jung, S., Marrano, A., Poelchau, M., Staton, M., Tello-Ruiz, M.K. "The AgBioData Research Coordination Network: Ensuring FAIR agricultural data through community-based standards." AG2PI Workshop “Harnessing the Ag Genomics Data Torrent: A Community-driven Discussion on Best Practices for Using and Reusing Genomics Data” (February 9, 2022). Invited oral presentation.
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Marrano, A., Campbell, D., Campbell, J., Cannon, E., Cooper, L., Harper, L., Huala, E., Jung, S., Poelchau, M., Reiser, L., Staton, M., Tello-Ruiz, M.K., "The AgBioData Research Coordination Network: Ensuring FAIR agricultural data through community-based standards." The 2022 North American Plant Phenotyping Network Annual Conference (February 22-25, 2022). Oral presentation.
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Jung, S. "AgBioData: Reimagining a Sustainable Data Network to Accelerate Agricultural Research and Discovery." The Genomics Aotearoa seminar series (March 25, 2022).
Invited seminar. -
Marrano, A., Campbell, D., Campbell, J., Cannon, E., Cooper, L., Harper, L., Huala, E., Kumari, S., Jung, S., Poelchau, M., Reiser, L., Staton, M., Tello-Ruiz, M.K. "The AgBioData Research Coordination Network: Ensuring FAIR agricultural data through community-based standards." The 2022 Plant Genome Online Conference (April 27-28, 2022). Oral presentation.
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Marrano, A., Campbell, D., Campbell, J., Cannon, E., Cooper, L., Harper, L., Huala, E., Kumari, S., Naithani, S., Jung, S., Poelchau, M., Reiser, L., Staton, M., Tello-Ruiz, M.K. "The AgBioData Research Coordination Network: Ensuring FAIR agricultural data through community-based standards." The Arthropod Genomics Symposium 2022 (July 9-11, 2022). Poster presentation.
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Marrano, A. "The AgBioData Research Coordination Network: creating community-based standards for more findable, accessible, and reusable agricultural data." The Bioinformatics Resources For Plant Biologists Workshop at the ASPB Plant Biology conference 2022 (July 9-13, 2022). Invited oral presentation.
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Jung, S. "Complementary Efforts By Other Databases, Initiatives and Networks to Facilitate Use of the Existing Genetic Diversity in the NPGS System and Other Collections (GDV, GDR, AgBioData)." The American Society for Horticultural Science 2022 Annual Conference (July 30-August 3, 2022). Oral presentation.
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